STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KCV83642.1Hemolysin-type calcium-binding repeat family protein; COG2931 RTX toxins and related Ca2+-binding proteins. (1073 aa)    
Predicted Functional Partners:
KCV83592.1
Hypothetical protein; RB139; COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.758
KCV80776.1
COG2931 RTX toxins and related Ca2+-binding proteins.
  
  0.742
KCV83023.1
Hypothetical protein.
 
  0.657
KCV81932.1
Hypothetical protein.
  
 
   0.626
KCV82220.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
 
    0.593
KCV81568.1
Phospholipase/lecithinase/hemolysin-like protein; COG3240 Phospholipase/lecithinase/hemolysin.
  
 
 
0.573
KCV81567.1
Phospholipase/lecithinase/hemolysin-like protein; COG3240 Phospholipase/lecithinase/hemolysin.
  
 
 
0.571
KCV83025.1
ATP-binding/permease fusion ABC transporter; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
  
 0.562
KCV81597.1
Hypothetical protein.
  
     0.557
KCV83026.1
COG0845 Membrane-fusion protein.
 
    0.550
Your Current Organism:
Actibacterium atlanticum
NCBI taxonomy Id: 1461693
Other names: A. atlanticum, Actibacterium atlanticum Li et al. 2015, Actibacterium sp. 22II-S11-z10, LMG 27158, LMG:27158, MCCC 1A09298, strain 22II-S11-z10
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