STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES37356.1Predicted arabinose efflux permease, MFS family. (418 aa)    
Predicted Functional Partners:
SES30006.1
Homoserine dehydrogenase.
   
  0.681
SES23095.1
Predicted arabinose efflux permease, MFS family.
  
     0.577
SER43897.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.570
SER93795.1
Tetratricopeptide repeat-containing protein.
  
     0.552
SER71415.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.427
SES20241.1
Ribosomal protein S18 acetylase RimI.
  
     0.417
SES31622.1
Peptide/nickel transport system substrate-binding protein.
 
     0.407
SES30968.1
Glutamate synthase (NADPH/NADH) large chain/glutamate synthase (ferredoxin).
      
 0.400
Your Current Organism:
Salisediminibacterium haloalkalitolerans
NCBI taxonomy Id: 1464123
Other names: CGMCC 1.12818, KCTC 33414, S. haloalkalitolerans, Salisediminibacterium haloalkalitolerans Sultanpuram et al. 2015, Salisediminibacterium sp. 10nlg, strain 10nlg
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