STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP84851.1Protein of unknown function. (224 aa)    
Predicted Functional Partners:
SFP84946.1
Hypothetical protein.
      0.947
SFP84874.1
alpha-L-rhamnosidase.
       0.658
SFP84733.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
       0.614
SFP84781.1
Hypothetical protein.
       0.601
SFP84828.1
Trehalase.
       0.601
SFP84756.1
Lysophospholipase L1.
       0.588
SFP84896.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.559
SFP84712.1
Putative collagen-binding domain of a collagenase.
       0.520
SFP84966.1
Sugar phosphate isomerase/epimerase.
       0.475
SFP84921.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
       0.433
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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