STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ12720.1Mannose-1-phosphate guanylyltransferase. (361 aa)    
Predicted Functional Partners:
SFP90676.1
Phosphomannomutase.
 
 0.931
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
 0.924
SFQ34642.1
Mannose-6-phosphate isomerase, type 2.
  
  0.864
SFQ12745.1
Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily.
       0.776
SFQ26404.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting).
  
 
 0.764
SFQ47990.1
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase/D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 
 0.728
SFP94394.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.711
SFP67089.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 
 0.676
SFQ16337.1
Sucrose-phosphate synthase.
  
 
 0.668
fbp
D-fructose 1,6-bisphosphatase; Belongs to the FBPase class 1 family.
   
 0.641
Your Current Organism:
Parafilimonas terrae
NCBI taxonomy Id: 1465490
Other names: DSM 28286, Filimonas sp. 5GHs7-2, KACC 17343, P. terrae, Parafilimonas terrae Kim et al. 2014, strain 5GHs7-2
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