STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDN30268.1Predicted Fe-Mo cluster-binding protein, NifX family. (125 aa)    
Predicted Functional Partners:
SDN30232.1
Predicted DNA-binding protein, UPF0251 family.
  
 0.990
SDM15873.1
Ferrous iron transport protein A.
 
   
 0.474
SDN30316.1
Hypothetical protein.
       0.465
SDN27007.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.460
SDN33184.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.460
SDM89031.1
4Fe-4S dicluster domain-containing protein.
 
  
 0.452
SDM86252.1
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein.
  
  
 0.432
SDL86223.1
Nitrogenase iron protein NifH; Belongs to the NifH/BchL/ChlL family.
 
  
 0.426
SDM24570.1
Diguanylate cyclase (GGDEF) domain-containing protein.
     
 0.426
SDM50943.1
Nitrogenase iron protein NifH; Belongs to the NifH/BchL/ChlL family.
 
  
 0.425
Your Current Organism:
Dendrosporobacter quercicolus
NCBI taxonomy Id: 146817
Other names: ATCC 25974, Clostridium quercicolum, D. quercicolus
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