STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSQ43635.1Sarcosine oxidase subunit alpha; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family. (997 aa)    
Predicted Functional Partners:
OSQ43634.1
Sarcosine oxidase subunit gamma; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OSQ43636.1
Sarcosine oxidase subunit delta; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OSQ43637.1
Sarcosine oxidase subunit beta; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OSQ37283.1
Sarcosine oxidase subunit delta; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OSQ37284.1
Sarcosine oxidase subunit beta; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
OSQ37281.1
Hypothetical protein; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.995
OSQ45077.1
Cytochrome Cbb3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 0.994
OSQ43632.1
Dehydrogenase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
 
0.994
gcvH
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
  
 0.992
OSQ41709.1
FAD-dependent oxidoreductase; Bacteria available from MCCC 1A01428. Source DNA available from MCCC 1A01428; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.985
Your Current Organism:
Thalassospira sp. MCCC1A01428
NCBI taxonomy Id: 1470575
Other names: T. sp. MCCC 1A01428, Thalassospira sp. MCCC 1A01428
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