STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE32563.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (82 aa)    
Predicted Functional Partners:
APE31385.1
Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.881
APE31388.1
acetate--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.818
APE31386.1
Alpha-ketoacid dehydrogenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.760
APE31387.1
Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.757
APE31389.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.443
Your Current Organism:
Halolamina sediminis
NCBI taxonomy Id: 1480675
Other names: CECT 8739, H. sediminis, Halolamina sediminis Koh et al. 2015, Halolamina sp. halo-7, JCM 30187, strain halo-7, strain halo7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.