STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002105285_02318Unannotated protein. (322 aa)    
Predicted Functional Partners:
GCA_002105285_01680
Unannotated protein.
  
 
 0.630
GCA_002105285_01032
Unannotated protein.
  
 
   0.628
GCA_002105285_01705
Unannotated protein.
  
  
 0.606
GCA_002105285_02778
Unannotated protein.
    
 0.564
GCA_002105285_01690
Unannotated protein.
    
 0.537
GCA_002105285_03050
Unannotated protein.
  
     0.516
GCA_002105285_02317
Unannotated protein.
       0.515
GCA_002105285_01682
Unannotated protein.
 
 
 0.508
GCA_002105285_01735
Unannotated protein.
  
 
   0.500
GCA_002105285_01876
Unannotated protein.
    
 0.498
Your Current Organism:
Planktotalea arctica
NCBI taxonomy Id: 1481893
Other names: KACC 18009, NBRC 110393, P. arctica, Planktotalea arctica Baek et al. 2017, Planktotalea sp. IMCC9565, strain IMCC9565
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.