STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000690905_00852Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_000690905_00016
Unannotated protein.
  
    0.741
GCA_000690905_04557
Unannotated protein.
  
     0.716
GCA_000690905_04849
Unannotated protein.
  
    0.685
GCA_000690905_03928
Unannotated protein.
  
    0.653
GCA_000690905_01056
Unannotated protein.
  
     0.615
GCA_000690905_01808
Unannotated protein.
  
     0.612
GCA_000690905_01951
Unannotated protein.
  
     0.599
GCA_000690905_03450
Unannotated protein.
  
     0.530
GCA_000690905_02211
Unannotated protein.
  
     0.513
GCA_000690905_00851
Unannotated protein.
       0.496
Your Current Organism:
Pseudomonas sp. Ant303
NCBI taxonomy Id: 1488328
Other names: P. sp. Ant30-3, Pseudomonas sp. Ant30-3
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.