STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000746275_01852Unannotated protein. (285 aa)    
Predicted Functional Partners:
GCA_000746275_01851
Unannotated protein.
   0.969
GCA_000746275_01853
Unannotated protein.
       0.642
GCA_000746275_00260
Unannotated protein.
    
 
 0.504
GCA_000746275_01419
Unannotated protein.
      0.473
GCA_000746275_02038
Unannotated protein.
 
  
 0.470
GCA_000746275_00977
Unannotated protein.
  
    0.455
GCA_000746275_01988
Unannotated protein.
  
   
 0.434
GCA_000746275_00301
Unannotated protein.
 
   
 0.428
GCA_000746275_00705
Unannotated protein.
  
    0.416
Your Current Organism:
Thermopetrobacter sp. TC1
NCBI taxonomy Id: 1495045
Other names: T. sp. TC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.