STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934725_01227Unannotated protein. (357 aa)    
Predicted Functional Partners:
GCA_000934725_00652
Unannotated protein.
  
 0.951
GCA_000934725_01141
Unannotated protein.
  
 0.951
GCA_000934725_02673
Unannotated protein.
   
  
 0.845
GCA_000934725_00646
Unannotated protein.
   
  
 0.825
GCA_000934725_02812
Unannotated protein.
   
   0.806
GCA_000934725_02557
Unannotated protein.
   
  0.731
GCA_000934725_02674
Unannotated protein.
   
  0.731
GCA_000934725_00497
Unannotated protein.
    
  0.715
GCA_000934725_01107
Unannotated protein.
    
  0.715
GCA_000934725_03969
Unannotated protein.
    
  0.715
Your Current Organism:
Methyloterricola oryzae
NCBI taxonomy Id: 1495050
Other names: LMG 29185, LMG:29185, M. oryzae, Methylococcaceae bacterium 73a, Methyloterricola oryzae Frindte et al. 2017, VKM B-2986, strain 73a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.