STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934725_01955Unannotated protein. (471 aa)    
Predicted Functional Partners:
GCA_000934725_02210
Unannotated protein.
 0.999
GCA_000934725_02211
Unannotated protein.
 0.999
GCA_000934725_02212
Unannotated protein.
 0.999
GCA_000934725_01641
Unannotated protein.
 
 0.986
GCA_000934725_01053
Unannotated protein.
 
 
 0.964
GCA_000934725_01639
Unannotated protein.
 
  
 0.960
GCA_000934725_01640
Unannotated protein.
 
  
 0.960
GCA_000934725_00391
Unannotated protein.
 
 
 0.937
GCA_000934725_01145
Unannotated protein.
    
 0.925
GCA_000934725_02209
Unannotated protein.
  
  
 
0.880
Your Current Organism:
Methyloterricola oryzae
NCBI taxonomy Id: 1495050
Other names: LMG 29185, LMG:29185, M. oryzae, Methylococcaceae bacterium 73a, Methyloterricola oryzae Frindte et al. 2017, VKM B-2986, strain 73a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.