STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMH93804.1Aldose 1-epimerase. (329 aa)    
Predicted Functional Partners:
AMH93803.1
UDP-glucose 4-epimerase GalE.
    
 0.971
AMH93805.1
Hypothetical protein.
       0.693
AMH95500.1
Ribokinase RbsK.
 
  
 0.507
apt
Adenine phosphoribosyltransferase Apt1; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.468
AMH93807.1
Bifunctional inositol-1 monophosphatase/fructose-1,6-bisphosphatase/ATP-NAD kinase.
  
    0.458
AMH93802.1
Hydrogenase expression/formation protein HypE.
       0.427
rpiA
Ribose 5-phosphate isomerase A RpiA; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
 0.418
AMH95319.1
Ribulose-5-phosphate 4-epimerase.
  
  
 0.413
Your Current Organism:
methanogenic archaeon ISO4H5
NCBI taxonomy Id: 1495144
Other names: Thermoplasmatales archaeon enrichment culture clone ISO4-H5, m. archaeon ISO4-H5, methanogenic archaeon ISO4-H5, methanogenic archaeon mixed culture ISO4-H5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.