STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMH95107.1Methyl-coenzyme M reductase component A2 AtwA. (531 aa)    
Predicted Functional Partners:
AMH95106.1
Methyl-coenzyme M reductase C subunit McrC.
    
 0.980
AMH95102.1
Methanogeneis marker protein 15.
 
     0.923
AMH95113.1
Methyl-coenzyme M reductase operon protein D McrD.
     
 0.923
AMH93996.1
CoB--CoM heterodisulfide reductase subunit B HdrB1.
  
  
 0.920
AMH93995.1
CoB--CoM heterodisulfide reductase subunit C HdrC.
  
  
 0.913
mrtA
Methyl-coenzyme M reductase alpha subunit McrA.
     
 0.910
AMH93765.1
CoB--CoM heterodisulfide reductase subunit D HdrD.
     
  0.900
AMH95042.1
Monomethylamine methyltransferase MtmB1.
     
  0.900
AMH95043.1
Monomethylamine methyltransferase MtmB2.
     
  0.900
AMH95112.1
Methyl-coenzyme M reductase gamma subunit McrG.
     
  0.900
Your Current Organism:
methanogenic archaeon ISO4H5
NCBI taxonomy Id: 1495144
Other names: Thermoplasmatales archaeon enrichment culture clone ISO4-H5, m. archaeon ISO4-H5, methanogenic archaeon ISO4-H5, methanogenic archaeon mixed culture ISO4-H5
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