STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EP47_08980Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology. (495 aa)    
Predicted Functional Partners:
EP47_01090
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.923
apaH
Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.898
EP47_10780
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.882
EP47_07640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
  0.873
EP47_06045
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.808
EP47_02990
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
   0.776
rpsC
30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
  0.755
EP47_09735
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.747
EP47_10390
Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.743
EP47_09660
Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.709
Your Current Organism:
Legionella norrlandica
NCBI taxonomy Id: 1498499
Other names: ATCC BAA-2678, CCUG 65936, L. norrlandica, Legionella norrlandica Rizzardi et al. 2015, Legionella sp. LEGN, strain LEGN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.