STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000821245_03558Unannotated protein. (273 aa)    
Predicted Functional Partners:
GCA_000821245_02790
Unannotated protein.
  
 
 0.735
GCA_000821245_02791
Unannotated protein.
  
 
 0.735
GCA_000821245_03316
Unannotated protein.
  
     0.670
GCA_000821245_00579
Unannotated protein.
    
   0.654
GCA_000821245_03680
Unannotated protein.
  
     0.654
GCA_000821245_00170
Unannotated protein.
  
     0.641
GCA_000821245_01407
Unannotated protein.
 
 
 0.632
GCA_000821245_00098
Unannotated protein.
  
     0.627
GCA_000821245_03727
Unannotated protein.
 
    0.623
GCA_000821245_00955
Unannotated protein.
  
     0.615
Your Current Organism:
Virgibacillus senegalensis
NCBI taxonomy Id: 1499679
Other names: CSUR P1101, DSM 28585, V. senegalensis, Virgibacillus sp. SK-1, strain SK-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.