STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U14_00780DTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (285 aa)    
Predicted Functional Partners:
U14_00781
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 0.996
U14_04876
Glucose-1-phosphate thymidylyltransferase.
  
 0.993
U14_02952
NAD-dependent epimerase/dehydratase.
 
 0.935
U14_04878
NAD-dependent epimerase/dehydratase.
 
 0.934
U14_04877
dTDP-4-dehydrorhamnose 3,5-epimerase.
 
 
 0.930
U14_02962
NAD-dependent epimerase/dehydratase.
 
 0.928
U14_03519
Oxidoreductase-like protein.
 
 0.928
U14_02953
dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme.
 
 
 0.925
U14_05897
NAD-dependent epimerase/dehydratase.
  
 0.925
U14_06026
ADP-L-glycero-D-manno-heptose-6-epimerase.
  
 0.916
Your Current Organism:
Moduliflexus flocculans
NCBI taxonomy Id: 1499966
Other names: C. Moduliflexus flocculans, Candidatus Moduliflexus flocculans, bacterium UASB14
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