STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_01028Binding-protein-dependent transport systems inner membrane component. (300 aa)    
Predicted Functional Partners:
U27_01029
Dipeptide ABC transporter, permease protein DppB.
 
 0.971
U27_01027
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 
 0.962
U27_01026
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
 
 
 0.961
U27_00430
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.937
U27_01636
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
 
 0.933
U27_04605
Binding-protein-dependent transport systems inner membrane component.
 
 0.933
U27_05115
Binding-protein-dependent transport systems inner membrane component.
 
 0.933
U27_02190
Hypothetical protein.
 
 0.932
U27_03456
Dipeptide transport system permease protein dppB.
 
 0.932
U27_05006
Binding-protein-dependent transport systems inner membrane component.
 
 0.932
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.