STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_02052ABC transporter related protein. (274 aa)    
Predicted Functional Partners:
U27_04627
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.999
U27_04626
Periplasmic binding protein.
 
 0.997
U27_06662
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.997
U27_06663
Periplasmic binding protein.
 
 0.991
U27_00731
Hypothetical protein.
  
 0.976
U27_01388
Hypothetical protein.
  
 0.976
U27_03196
Hypothetical protein.
  
 0.976
U27_03375
Hypothetical protein.
  
 0.976
U27_03657
Hypothetical protein.
  
 0.976
U27_05267
Hypothetical protein.
  
 0.976
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.