STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_03720Hypothetical cytosolic protein. (322 aa)    
Predicted Functional Partners:
U27_02317
DNA deoxyribo-dipyrimidine photolyase family protein.
 
  
 0.928
U27_00602
Hypothetical protein.
   
   0.878
U27_02390
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
   
   0.878
U27_04464
Hypothetical protein.
   
   0.878
U27_04465
FAD dependent oxidoreductase.
   
   0.878
U27_05479
Thioredoxin reductase.
   
   0.878
U27_05546
FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
   
   0.878
U27_03908
AMP nucleosidase.
   
 
  0.712
U27_04338
phosphoribosyl-ATP diphosphatase; Belongs to the HisA/HisF family.
  
    0.677
U27_01994
PEGA domain protein.
  
    0.673
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.