STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
U27_06834ABC transporter. (252 aa)    
Predicted Functional Partners:
U27_06833
ABC-3 protein.
 0.999
U27_06835
Zinc ABC-transporter zinc-binding protein component.
 
 
 0.994
U27_02704
Hypothetical protein.
  
 
 0.876
U27_06836
Ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.810
U27_00837
Ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.722
U27_07063
Ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.722
U27_02944
TolQ1 protein.
   
  
 0.685
U27_04069
MotA/TolQ/ExbB proton channel.
   
  
 0.685
U27_06660
MotA/TolQ/ExbB proton channel.
   
  
 0.685
U27_04658
Extracellular solute-binding protein family 1.
    
 0.648
Your Current Organism:
Vecturithrix granuli
NCBI taxonomy Id: 1499967
Other names: C. Vecturithrix granuli, Candidatus Vecturithrix granuli, bacterium UASB270
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.