STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA48075.1Stage IV sporulation protein FA. (242 aa)    
Predicted Functional Partners:
SFA48082.1
Stage IV sporulation protein FB.
 
  
 0.941
SFA48219.1
Putative membrane protein, TIGR04086 family.
  
    0.779
SFA56462.1
Stage VI sporulation protein D.
  
   
 0.751
SFA41923.1
Conserved membrane protein YqhR.
  
     0.730
SFA51346.1
Spore cortex biosynthesis protein YabQ.
  
     0.723
SFA42014.1
Protein YqhG of unknown function.
  
     0.714
SFA45809.1
Protein of unknown function; Belongs to the UPF0736 family.
  
     0.709
SFA51328.1
Ca-activated chloride channel family protein.
  
    0.695
SFA48836.1
Hypothetical protein.
  
     0.694
SFA56553.1
Inhibitor of the pro-sigma K processing machinery.
  
   
 0.694
Your Current Organism:
Anoxybacillus pushchinoensis
NCBI taxonomy Id: 150248
Other names: A. pushchinoensis, ATCC 700785, Anoxybacillus pushchinensis, Anoxybacillus pushchinoensis corrig. Pikuta et al. 2000 emend. Pikuta et al. 2003, Bacillus sp. k-1, Bacillus sp. strain k-1, DSM 12423, VKM B-2193, strain K1
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