STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDY93422.1Tagaturonate reductase. (504 aa)    
Predicted Functional Partners:
SDY93373.1
Altronate hydrolase.
 
 0.974
uxaC
Glucuronate isomerase.
 
 
 0.945
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.901
uxuA-2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.896
SDZ10266.1
PTS system, mannitol-specific IIA component.
  
 
 0.891
SDZ10214.1
PTS system, mannitol-specific IIC component.
  
 
 0.889
SDZ10239.1
Mannitol operon transcriptional antiterminator.
 
 
 0.861
SDY34069.1
PTS system, fructose-specific IIC component.
  
 
 0.858
SDZ60631.1
PTS system, fructose-specific IIC component.
  
 
 0.858
SDZ60621.1
Transcriptional antiterminator.
  
 
 0.807
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.