STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ65629.1PTS system, ascorbate-specific IIA component. (149 aa)    
Predicted Functional Partners:
SDZ65634.1
PTS system, ascorbate-specific IIB component.
 
 
 0.980
SDZ10239.1
Mannitol operon transcriptional antiterminator.
 
 0.970
SDZ65640.1
PTS system, ascorbate-specific IIC component.
 
 
 0.960
SDZ61380.1
PTS system, ascorbate-specific IIB component.
 
 
 0.937
SDZ61547.1
PTS system, ascorbate-specific IIB component.
 
 
 0.936
SDZ65793.1
Lichenan operon transcriptional antiterminator.
 
 0.934
SDZ61391.1
PTS system, ascorbate-specific IIC component.
 
 
 0.932
SDZ61558.1
PTS system, ascorbate-specific IIC component.
 
 
 0.932
SDY34069.1
PTS system, fructose-specific IIC component.
  
 
 0.930
SDZ60631.1
PTS system, fructose-specific IIC component.
  
 
 0.930
Your Current Organism:
Bacillus caseinilyticus
NCBI taxonomy Id: 1503961
Other names: B. caseinilyticus, Bacillus caseinilyticus Reddy et al. 2015, Bacillus sp. SP, JCM 30246, MCC 2612, strain SP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.