STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GQ55_9G147500Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
GQ55_5G504900
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.742
GQ55_2G479700
Uncharacterized protein.
    
 
 0.712
GQ55_6G238800
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.690
GQ55_2G296100
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.690
GQ55_1G051100
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.690
GQ55_4G053500
CBFD_NFYB_HMF domain-containing protein.
  
 
 0.686
GQ55_6G050000
CBFD_NFYB_HMF domain-containing protein.
  
 0.685
GQ55_3G054400
Histone domain-containing protein.
  
 
 0.685
GQ55_5G026800
CBFD_NFYB_HMF domain-containing protein.
  
 0.663
GQ55_3G238700
CBFD_NFYB_HMF domain-containing protein.
  
 0.659
Your Current Organism:
Panicum hallii
NCBI taxonomy Id: 1504633
Other names: P. hallii var. hallii, Panicum hallii var. hallii
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.