STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDX41524.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (365 aa)    
Predicted Functional Partners:
CDX41521.1
RimK domain-containing protein ATP-grasp.
     0.957
CDX16071.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
   0.575
CDX35577.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
   
   0.575
CDX15942.1
Peptidase M22 glycoprotease.
  
 0.458
CDX41519.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.450
CDX41527.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.441
CDX41530.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.441
CDX29240.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.429
Your Current Organism:
Mesorhizobium sp. SOD10
NCBI taxonomy Id: 1505946
Other names: M. sp. SOD10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.