STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_16916Aamy domain-containing protein. (588 aa)    
Predicted Functional Partners:
B0A48_06970
Uncharacterized protein.
  
 
 0.808
B0A48_08390
CBM20 domain-containing protein.
    
 0.787
B0A48_14697
1,4-alpha-glucan-branching enzyme.
  
 
 0.734
B0A48_14259
1,4-alpha-glucan-branching enzyme.
  
 
 0.734
B0A48_11879
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.689
B0A48_07532
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.689
B0A48_11722
Glyco_hydro_15 domain-containing protein.
    
 0.665
B0A48_07682
Glyco_hydro_15 domain-containing protein.
    
 0.665
B0A48_17488
Uncharacterized protein.
    
 0.659
B0A48_14752
Uncharacterized protein.
    
 0.659
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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