STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_17445Protein kinase domain-containing protein. (540 aa)    
Predicted Functional Partners:
B0A48_02935
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily.
   
 0.995
B0A48_12994
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.985
B0A48_04055
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.985
B0A48_12250
Rhodanese domain-containing protein.
   
 0.983
B0A48_03346
Rhodanese domain-containing protein.
   
 0.983
B0A48_07249
Uncharacterized protein.
  
0.980
B0A48_05979
Uncharacterized protein.
  
0.980
B0A48_15122
DNA helicase; Belongs to the MCM family.
   
 0.962
B0A48_03186
DNA helicase; Belongs to the MCM family.
   
 0.962
B0A48_08317
Amidohydro-rel domain-containing protein.
   
 0.959
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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