STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_1339260S ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family. (149 aa)    
Predicted Functional Partners:
B0A48_09949
40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.999
B0A48_17109
60S ribosomal protein L21-A.
   
 0.999
B0A48_05577
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.999
B0A48_13686
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.999
B0A48_13231
Uncharacterized protein.
   
 0.999
B0A48_12276
60S ribosomal protein L30.
   
 0.999
B0A48_09004
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 
 0.999
B0A48_11499
40S ribosomal protein S27.
   
 
 0.999
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 
 0.999
B0A48_08945
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.999
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.