STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_12653Uncharacterized protein. (1364 aa)    
Predicted Functional Partners:
B0A48_05683
Uncharacterized protein.
    
 0.960
B0A48_16771
Serine/threonine-protein kinase.
    
 0.801
B0A48_14309
Serine/threonine-protein kinase.
    
 0.801
B0A48_08380
Uncharacterized protein.
    
 0.708
B0A48_04248
Uncharacterized protein.
    
 0.708
B0A48_10786
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.678
B0A48_08921
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 0.678
B0A48_14710
Autophagy-related protein.
    
  0.656
B0A48_14245
Autophagy-related protein.
    
  0.656
B0A48_18273
Protein kinase domain-containing protein.
    
 0.649
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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