STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_10448Atx10homo_assoc domain-containing protein. (1159 aa)    
Predicted Functional Partners:
B0A48_01454
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
 
      0.623
B0A48_16144
Importin N-terminal domain-containing protein.
   
  
 0.516
B0A48_15963
Importin N-terminal domain-containing protein.
   
  
 0.516
B0A48_03999
Chitin-binding type-4 domain-containing protein.
      
 0.503
B0A48_00631
Uncharacterized protein.
      
 0.503
B0A48_02975
Vacuolar protein sorting-associated protein 26.
      
 0.502
B0A48_10897
Uncharacterized protein.
  
     0.485
B0A48_08815
Uncharacterized protein.
  
     0.484
B0A48_12285
Uncharacterized protein.
  
     0.472
B0A48_17919
Fes1 domain-containing protein.
      
 0.456
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
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