STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B0A48_06242Uncharacterized protein. (956 aa)    
Predicted Functional Partners:
B0A48_17088
Zn(2)-C6 fungal-type domain-containing protein.
 
      0.625
B0A48_13204
Uncharacterized protein.
 
      0.585
B0A48_05498
HORMA domain-containing protein.
   
 
 0.548
B0A48_01571
HORMA domain-containing protein.
   
 
 0.548
B0A48_05409
Uncharacterized protein.
   
 
 0.532
B0A48_01748
Uncharacterized protein.
   
 
 0.532
B0A48_07205
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
  
 0.520
B0A48_05935
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
  
 0.520
B0A48_17430
MutL_C domain-containing protein.
    
 
 0.465
B0A48_11250
MutL_C domain-containing protein.
    
 
 0.465
Your Current Organism:
Rachicladosporium antarcticum
NCBI taxonomy Id: 1507870
Other names: CCFEE 5527, R. antarcticum, Rachicladosporium antarcticum Onofri & Egidi, 2014
Server load: low (28%) [HD]