STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JMA_08650Sugar ABC transporter substrate-binding protein. (392 aa)    
Predicted Functional Partners:
JMA_08680
ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
JMA_08670
Monosaccharide-transporting ATPase.
 
 0.988
JMA_08690
LacI family transcriptional regulator.
 
 
0.944
JMA_08660
Dehydrogenase.
 
    0.931
JMA_08630
Sugar phosphate isomerase.
 
    0.897
JMA_08640
Hypothetical protein.
 
    0.896
JMA_33050
ABC transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.889
JMA_33060
Monosaccharide-transporting ATPase.
 
 
 0.845
JMA_14950
Chemotaxis protein CheV.
   
 
 0.694
JMA_09780
Hypothetical protein.
   
 
 0.660
Your Current Organism:
Jeotgalibacillus malaysiensis
NCBI taxonomy Id: 1508404
Other names: DSM 28777, J. malaysiensis, Jeotgalibacillus malaysiensis Yaakop et al. 2015, Jeotgalibacillus sp. D5, KCTC 33550, strain D5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.