STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASQ42_01255Unannotated protein. (836 aa)    
Predicted Functional Partners:
ASQ42_04780
Unannotated protein.
  
 
  0.802
ASQ42_08785
Unannotated protein.
  
 
  0.793
ASQ42_04340
Unannotated protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.752
ASQ42_02335
Unannotated protein.
  
 
  0.749
ASQ42_03250
Unannotated protein.
  
  
0.727
ASQ42_04360
Unannotated protein.
  
     0.697
ASQ42_01260
Unannotated protein; Belongs to the purine-cytosine permease (2.A.39) family.
       0.648
ASQ42_01250
Unannotated protein.
       0.639
ASQ42_00350
Unannotated protein.
  
   0.567
GCA_002079945_00260
Unannotated protein.
  
 
  0.506
Your Current Organism:
Parasaccharibacter apium
NCBI taxonomy Id: 1510841
Other names: ATCC SD-6836, Acetobacteraceae bacterium A29, Acetobacteraceae bacterium B8, Acetobacteraceae bacterium C6, P. apium, strain A29
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