STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21139.1Protein of unknown function; No homology to any previously reported sequences. (284 aa)    
Predicted Functional Partners:
CBH21140.1
Homologs of previously reported genes of unknown function.
       0.548
CBH22625.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.545
CBH21138.1
PP-loop family protein; Belongs to the TtcA family.
       0.514
OmpR
Transcription response regulator-like protein.
  
    0.481
npdA
NAD-dependent deacetylase (Regulatory protein SIR2 homolog); NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
  
 
 0.479
CBH21142.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
       0.475
pykF
Pyruvate kinase I; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the pyruvate kinase family.
  
    0.436
CBH20807.1
ABC-type sugar transport system periplasmic component-like protein.
  
     0.433
CBH21136.1
Drug/metabolite efflux pump, DME (10TM) family, DMT superfamily.
       0.424
CBH21143.1
Protein of unknown function; No homology to any previously reported sequences.
       0.410
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.