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kamD protein (Clostridium sticklandii) - STRING interaction network
"kamD" - Lysine 5,6-aminomutase alpha subunit in Clostridium sticklandii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
kamDLysine 5,6-aminomutase alpha subunit; Catalyzes the migration of the L-beta-lysine and D- lysine epsilon amino group to the delta carbon to produce 3,5- diaminohexanoate and 2,5-diaminohexanoate, respectively (519 aa)    
Predicted Functional Partners:
kamE
Lysine 5,6-aminomutase beta subunit; Catalyzes the migration of the L-beta-lysine and D- lysine epsilon amino group to the delta carbon to produce 3,5- diaminohexanoate and 2,5-diaminohexanoate, respectively (262 aa)
 
    0.998
kdd
L-erythro-3,5-diaminohexanoate dehydrogenase; Involved in the anaerobic fermentation of lysine. Catalyzes the oxidative deamination of L-erythro-3,5- diaminohexanoate (3,5-DAH) to 3-keto-5-aminohexanoate (KAH); Belongs to the KDD family (344 aa)
 
   
  0.994
kamA
L-lysine 2,3-aminomutase; Catalyzes the interconversion of L-alpha-lysine and L- beta-lysine (414 aa)
 
   
  0.994
CLOST_1381
Uncharacterized protein; Evidence 4 - Homologs of previously reported genes of unknown function (340 aa)
 
          0.975
CLOST_1380
annotation not available (486 aa)
 
          0.962
ord
2,4-diaminopentanoate dehydrogenase; Involved in the ornithine fermentation pathway. Catalyzes the oxidative deamination of (2R,4S)-2,4- diaminopentanoate (DAP) to yield 2-amino-4-ketopentanoate (AKP); Belongs to the DapB family (353 aa)
   
   
    0.924
kal
3-aminobutyryl-CoA ammonia lyase; Involved in the anaerobic fermentation of lysine. Catalyzes the deamination of L-3-aminobutyryl-CoA to produce crotonoyl-CoA; Belongs to the KAL family (126 aa)
 
     
  0.922
kce
3-keto-5-aminohexanoate cleavage enzyme; Involved in the anaerobic fermentation of lysine. Catalyzes the reversible reaction between 3-keto-5-aminohexanoate (KAH) and acetyl-CoA to form 3-aminobutyryl-CoA and acetoacetate. The reaction involves the deprotonation of KAH, the nucleophilic addition onto acetyl-CoA and the intramolecular transfer of the CoA moiety; Belongs to the KCE family (273 aa)
 
     
  0.872
CLOST_0198
Uncharacterized protein; Evidence 4 - Homologs of previously reported genes of unknown function (277 aa)
 
     
  0.622
ppdK
annotation not available (881 aa)
         
  0.532
Your Current Organism:
Clostridium sticklandii
NCBI taxonomy Id: 1511
Other names: ATCC 12662, BCRC 14485, CCRC 14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, [. sticklandii, [Clostridium] sticklandii, strain StadtmanHF
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