Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBH20902.1 | CBH22033.1 | CLOST_0776 | CLOST_1913 | Putative iron-sulfur protein (Cysteine-rich domain protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Homologs of previously reported genes of unknown function. | 0.660 |
CBH20902.1 | CBH22409.1 | CLOST_0776 | CLOST_2292 | Putative iron-sulfur protein (Cysteine-rich domain protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.637 |
CBH21364.1 | CBH22033.1 | CLOST_1244 | CLOST_1913 | Methylcitrate synthase. | Homologs of previously reported genes of unknown function. | 0.958 |
CBH21364.1 | CBH22409.1 | CLOST_1244 | CLOST_2292 | Methylcitrate synthase. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.406 |
CBH22033.1 | CBH20902.1 | CLOST_1913 | CLOST_0776 | Homologs of previously reported genes of unknown function. | Putative iron-sulfur protein (Cysteine-rich domain protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.660 |
CBH22033.1 | CBH21364.1 | CLOST_1913 | CLOST_1244 | Homologs of previously reported genes of unknown function. | Methylcitrate synthase. | 0.958 |
CBH22033.1 | CBH22409.1 | CLOST_1913 | CLOST_2292 | Homologs of previously reported genes of unknown function. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.694 |
CBH22033.1 | asrA | CLOST_1913 | CLOST_2029 | Homologs of previously reported genes of unknown function. | Anaerobic sulfite reductase subunit A (Anaerobic sulfite reductase iron-sulfur subunit). | 0.660 |
CBH22409.1 | CBH20902.1 | CLOST_2292 | CLOST_0776 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Putative iron-sulfur protein (Cysteine-rich domain protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.637 |
CBH22409.1 | CBH21364.1 | CLOST_2292 | CLOST_1244 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Methylcitrate synthase. | 0.406 |
CBH22409.1 | CBH22033.1 | CLOST_2292 | CLOST_1913 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Homologs of previously reported genes of unknown function. | 0.694 |
CBH22409.1 | asrA | CLOST_2292 | CLOST_2029 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Anaerobic sulfite reductase subunit A (Anaerobic sulfite reductase iron-sulfur subunit). | 0.637 |
CBH22409.1 | ycnD | CLOST_2292 | CLOST_2291 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | YcnD; Belongs to the flavin oxidoreductase frp family. | 0.527 |
asrA | CBH22033.1 | CLOST_2029 | CLOST_1913 | Anaerobic sulfite reductase subunit A (Anaerobic sulfite reductase iron-sulfur subunit). | Homologs of previously reported genes of unknown function. | 0.660 |
asrA | CBH22409.1 | CLOST_2029 | CLOST_2292 | Anaerobic sulfite reductase subunit A (Anaerobic sulfite reductase iron-sulfur subunit). | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.637 |
ycnD | CBH22409.1 | CLOST_2291 | CLOST_2292 | YcnD; Belongs to the flavin oxidoreductase frp family. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.527 |