STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF10628.1solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (475 aa)    
Predicted Functional Partners:
SMF04978.1
Signal transduction histidine kinase.
  
 0.900
SMF26408.1
Response regulator receiver domain-containing protein.
  
 0.900
SMF10637.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
 
     0.893
SMF50204.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
 
 0.864
SMF46923.1
L-proline dehydrogenase.
  
  
 0.842
SMF58293.1
Signal transduction histidine kinase.
  
 
 0.835
SMF10619.1
Amidohydrolase.
 
    0.833
SMF59584.1
Hpt domain-containing protein.
  
 
 0.833
SMF36217.1
Signal transduction histidine kinase.
  
 
 0.832
SMF73262.1
PAS domain S-box-containing protein.
  
 
 0.832
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.