STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFW11868.1alpha-L-fucosidase 2. (789 aa)    
Predicted Functional Partners:
SFW11880.1
AraC-type DNA-binding protein.
 
     0.826
SFW12471.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
   0.664
SFW19217.1
Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
   0.656
SFW38777.1
Hypothetical protein.
  
 
  0.640
SFW38935.1
Autotransporter-associated beta strand repeat-containing protein.
  
  
  0.626
SFW27300.1
Endonuclease/Exonuclease/phosphatase family protein; Manually curated.
  
  0.592
SFW35317.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.567
SFW40020.1
Alpha-L-arabinofuranosidase.
  
  
  0.557
SFW38830.1
Glycosyl hydrolases family 43.
 
  
  0.531
SFW38903.1
Endo-1,4-beta-xylanase, GH35 family.
  
  
  0.520
Your Current Organism:
Prevotellaceae bacterium HUN156
NCBI taxonomy Id: 1520830
Other names: P. bacterium HUN156
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