STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375555_00811Unannotated protein. (470 aa)    
Predicted Functional Partners:
GCA_001375555_00061
Unannotated protein.
   
 0.914
GCA_001375555_00066
Unannotated protein.
   
 0.914
GCA_001375555_02312
Unannotated protein.
   
 0.914
GCA_001375555_03353
Unannotated protein.
   
 0.750
GCA_001375555_00469
Unannotated protein.
    
  0.719
GCA_001375555_00810
Unannotated protein.
 
  
 0.711
GCA_001375555_00813
Unannotated protein.
 
     0.674
GCA_001375555_00812
Unannotated protein.
    
 0.626
GCA_001375555_02295
Unannotated protein.
 
 
 0.619
GCA_001375555_01592
Unannotated protein.
    
  0.598
Your Current Organism:
Numidum massiliense
NCBI taxonomy Id: 1522315
Other names: CSUR P1305, DSM 29571, N. massiliense, bacterium mt3, strain mt3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.