STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000826085_00073Unannotated protein. (102 aa)    
Predicted Functional Partners:
GCA_000826085_00072
Unannotated protein.
 
 0.999
GCA_000826085_00074
Unannotated protein.
 
 0.999
GCA_000826085_01295
Unannotated protein.
     
 0.903
GCA_000826085_01988
Unannotated protein.
     
 0.803
GCA_000826085_01976
Unannotated protein.
     
 0.793
GCA_000826085_00805
Unannotated protein.
     
 0.700
GCA_000826085_01602
Unannotated protein.
     
 0.700
GCA_000826085_00871
Unannotated protein.
    
  0.663
GCA_000826085_01040
Unannotated protein.
    
  0.663
GCA_000826085_00009
Unannotated protein.
   
  
 0.451
Your Current Organism:
Nigerium massiliense
NCBI taxonomy Id: 1522317
Other names: CSUR P1302, N. massiliense, bacterium SIT5, strain SIT5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.