KMJ54918.1 protein (Vogesella sp. EB) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KMJ54918.1

Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology. (649 aa)

Predicted Functional Partners:

KMJ54906.1

0.975

KMJ54909.1

0.972

KMJ54914.1

0.972

KMJ54905.1

0.971

KMJ54907.1

0.969

KMJ54916.1

0.966

KMJ54903.1

0.963

KMJ54904.1

0.958

KMJ54900.1

0.945

KMJ54977.1

0.931

Your Current Organism:

Vogesella sp. EB

NCBI taxonomy Id: 1526735
Other names: V. sp. EB

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KMJ54900.1	KMJ54903.1	ACG97_01105	ACG97_01135	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KMJ54900.1	KMJ54904.1	ACG97_01105	ACG97_01140	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
KMJ54900.1	KMJ54905.1	ACG97_01105	ACG97_01160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
KMJ54900.1	KMJ54906.1	ACG97_01105	ACG97_01165	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
KMJ54900.1	KMJ54907.1	ACG97_01105	ACG97_01170	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KMJ54900.1	KMJ54909.1	ACG97_01105	ACG97_01180	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.985
KMJ54900.1	KMJ54914.1	ACG97_01105	ACG97_01205	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.988
KMJ54900.1	KMJ54916.1	ACG97_01105	ACG97_01215	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.787
KMJ54900.1	KMJ54918.1	ACG97_01105	ACG97_01225	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.945
KMJ54900.1	KMJ54977.1	ACG97_01105	ACG97_01115	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KMJ54903.1	KMJ54900.1	ACG97_01135	ACG97_01105	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KMJ54903.1	KMJ54904.1	ACG97_01135	ACG97_01140	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
KMJ54903.1	KMJ54905.1	ACG97_01135	ACG97_01160	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KMJ54903.1	KMJ54906.1	ACG97_01135	ACG97_01165	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
KMJ54903.1	KMJ54907.1	ACG97_01135	ACG97_01170	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage baseplate protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
KMJ54903.1	KMJ54909.1	ACG97_01135	ACG97_01180	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KMJ54903.1	KMJ54914.1	ACG97_01135	ACG97_01205	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KMJ54903.1	KMJ54916.1	ACG97_01135	ACG97_01215	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.737
KMJ54903.1	KMJ54918.1	ACG97_01135	ACG97_01225	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
KMJ54903.1	KMJ54977.1	ACG97_01135	ACG97_01115	Major tail tube protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996