STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM39569.1Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (462 aa)    
Predicted Functional Partners:
SDM39535.1
Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.974
SDM39551.1
Multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 0.974
SDM39516.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.936
SDM68389.1
Multidrug efflux pump.
 0.925
SDL92526.1
Hydrophobic/amphiphilic exporter-1, HAE1 family.
 0.924
SDM68399.1
Outer membrane protein, multidrug efflux system.
 
 0.904
SDL92508.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.900
SDM30080.1
Outer membrane protein/outer membrane protein, protease secretion system.
 
 0.859
SDL97980.1
Outer membrane protein.
  
 0.837
SDL97149.1
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family.
 
 0.823
Your Current Organism:
Oryzisolibacter propanilivorax
NCBI taxonomy Id: 1527607
Other names: Alicycliphilus sp. EPL6, Alicycliphilus sp. LMG 28427, CECT 8927, LMG 28427, LMG:28427, O. propanilivorax, Oryzisolibacter propanilivorax Vaz-Moreira et al. 2017, strain EPL6
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