STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mgmmethylmalonyl-CoA mutase C-terminal domain-containing protein; Involved in the fermentation of nicotinate to ammonia, propionate, acetate and carbon dioxide. (614 aa)    
Predicted Functional Partners:
MgmL
Conserved hypothetical protein.
 
  
 0.968
mii
Methylitaconate delta2-delta3-isomerase; Catalyzes the reversible isomerization of (R)-3- methylitaconate to 2,3-dimethylmaleate. Has very low isomerase activity with itaconate.
 
  
  0.948
SDX95577.1
L-serine dehydratase.
 
     0.927
SDX31168.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.903
SDY18162.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.903
Hnr
NAD-dependent dihydropyrimidine dehydrogenase, PreA subunit; Catalyzes the reversible reduction of 6-hydroxynicotinate to 6-oxo-1,4,5,6-tetrahydronicotinate.
 
  
  0.865
Dml
Carboxyvinyl-carboxyphosphonate phosphorylmutase; Catalyzes the formation of proponate and pyruvate from (2R,3S)-2,3-dimethylmalate. Has no activity toward dimethylmaleate, malate, citramalate, isocitrate and citrate.
 
   
 0.856
SDX95753.1
Amino acid synthesis.
 
     0.854
Ena
Enamidase; Decyclization of 6-oxo-1,4,5,6-tetrahydronicotinate to form 2-(enamine)glutarate, followed by hydrolysis to form (S)-2- formylglutarate; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.
 
     0.853
SDY07782.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
    
 0.846
Your Current Organism:
Eubacterium barkeri
NCBI taxonomy Id: 1528
Other names: ATCC 25849, CIP 104307, Clostridium barkeri, E. barkeri, Inflabilis barati, VPI 5359
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