STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1525Hypothetical protein. (505 aa)    
Predicted Functional Partners:
MYP_1571
phytanoyl-CoA dioxygenase PhyH.
 
     0.695
MYP_879
Hypothetical protein.
  
     0.673
MYP_1527
Nucleotidyltransferase.
 
     0.650
MYP_3971
Hypothetical protein.
  
     0.591
MYP_1524
Zn-dependent alcohol dehydrogenase.
    
  0.566
MYP_4710
Hypothetical protein CHU_2548.
  
     0.551
MYP_1575
Hypothetical protein.
 
     0.478
MYP_3418
Hypothetical protein CHU_3448.
  
     0.478
MYP_2048
Hypothetical protein FBFL15_0778.
  
     0.468
MYP_4440
Outer membrane integrity protein.
  
     0.465
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.