STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_1626Hypothetical protein. (1543 aa)    
Predicted Functional Partners:
MYP_1627
Hypothetical protein CHU_1797.
 
     0.884
MYP_1628
Hypothetical protein.
 
 
  0.760
MYP_2602
TonB-dependent receptor.
  
     0.577
MYP_1466
Na-Ca exchanger/integrin-beta4.
    
  0.529
MYP_1601
Peptidase S8/S53 subtilisin kexin sedolisin.
    
  0.529
MYP_3688
Hypothetical protein.
    
  0.494
MYP_2776
Hypothetical protein.
  
  
  0.490
MYP_566
Hypothetical protein CHU_1797.
  
     0.448
MYP_1052
Glycoside hydrolase.
  
 
  0.443
MYP_92
Hypothetical protein.
  
     0.443
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.