STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYP_422ABC transporter permease. (372 aa)    
Predicted Functional Partners:
MYP_419
ATPase.
 
 0.993
MYP_420
ABC transporter.
 
 0.993
MYP_1717
Hypothetical protein.
 
 
 0.945
MYP_4259
Multidrug ABC transporter ATPase.
 
 
 0.942
MYP_2216
Gliding motility protein GldA.
 
 
 
 0.938
MYP_4404
ABC transporter ATP-binding protein.
   
  0.933
MYP_418
Hypothetical protein Solca_2544.
 
   
 0.901
MYP_1058
Fluoroquinolones export ATP-binding protein.
 
      0.900
MYP_2418
Phosphonate-transporting ATPase.
      0.883
MYP_421
Multidrug ABC transporter permease.
 
  
 
0.879
Your Current Organism:
Sporocytophaga myxococcoides
NCBI taxonomy Id: 153721
Other names: ATCC 10010, Cytophaga myxococcoides, DSM 11118, LMG 8393, LMG:8393, S. myxococcoides, Spirochaeta cytophaga
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.