STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADZ25798.1PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: slt:Slit_0986 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain. (118 aa)    
Predicted Functional Partners:
cbbL
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.998
cbbL-2
Ribulose-bisphosphate carboxylase; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site; Belongs to the RuBisCO large chain family. Type I subfamily.
 
 0.996
ADZ26265.1
Phosphoribulokinase; KEGG: nmu:Nmul_A0562 phosphoribulokinase; PFAM: Phosphoribulokinase/uridine kinase.
 
 
 0.950
ADZ27728.1
PFAM: Ribulose bisphosphate carboxylase, small chain; KEGG: nmu:Nmul_A0685 ribulose-bisphosphate carboxylase; SMART: Ribulose bisphosphate carboxylase, small chain.
  
  
 
0.916
ADZ25489.1
Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.
    
 0.911
pgk
HAMAP: Phosphoglycerate kinase; KEGG: neu:NE0326 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.907
ADZ25796.1
KEGG: neu:NE1918 von Willebrand factor type A domain-containing protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A.
 
   
 0.876
ADZ25797.1
KEGG: neu:NE1919 nitric oxide reductase NorQ protein.
 
  
 0.739
ADZ25915.1
KEGG: slt:Slit_0989 hypothetical protein.
 
     0.730
ADZ25800.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: nmu:Nmul_A0687 LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
   
 0.710
Your Current Organism:
Nitrosomonas sp. AL212
NCBI taxonomy Id: 153948
Other names: N. sp. AL212
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