STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
wcaJ_1Sugar transferase. (198 aa)    
Predicted Functional Partners:
hyaD_1
Glycosyl transferase.
 
  
 0.861
arnB_1
DegT/DnrJ/EryC1/StrS aminotransferase.
  
 0.846
cpsD_1
Capsular exopolysaccharide family.
 
 
 0.840
cpsD_2
Capsular exopolysaccharide family.
 
 
 0.835
capD_1
Putative nucleoside-diphosphate sugar epimerase.
 
 0.832
CUN59401.1
Carbamoyl phosphate synthase-like protein.
    
 0.806
lacA_2
Acetyltransferase (isoleucine patch superfamily).
  
  
 0.790
wbbL_1
Family 2 glycosyl transferase.
  
 
 0.788
dapH_2
Sugar O-acyltransferase%2C sialic acid O-acetyltransferase NeuD family.
    0.771
CUN59509.1
Uncharacterized protein involved in methicillin resistance.
      0.770
Your Current Organism:
Hungatella hathewayi
NCBI taxonomy Id: 154046
Other names: CCUG 43506, Clostridium hathewayi, Clostridium hathewayi Steer et al. 2002, DSM 13479, H. hathewayi, Hungatella hathewayi (Steer et al. 2002) Kaur et al. 2014, MTCC 10951
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