Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CUN99412.1 | adhE_3 | ERS852407_01581 | ERS852407_01589 | Microcompartments protein. | Aldehyde dehydrogenase family protein. | 0.668 |
| CUN99412.1 | csdA_2 | ERS852407_01581 | ERS852407_01587 | Microcompartments protein. | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | 0.882 |
| CUN99412.1 | csdB | ERS852407_01581 | ERS852407_01588 | Microcompartments protein. | Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. | 0.890 |
| CUN99412.1 | eutJ1 | ERS852407_01581 | ERS852407_01582 | Microcompartments protein. | Ethanolamine utilization protein. | 0.959 |
| adhE_3 | CUN99412.1 | ERS852407_01589 | ERS852407_01581 | Aldehyde dehydrogenase family protein. | Microcompartments protein. | 0.668 |
| adhE_3 | csdA_2 | ERS852407_01589 | ERS852407_01587 | Aldehyde dehydrogenase family protein. | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | 0.836 |
| adhE_3 | csdB | ERS852407_01589 | ERS852407_01588 | Aldehyde dehydrogenase family protein. | Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. | 0.904 |
| adhE_3 | eutJ1 | ERS852407_01589 | ERS852407_01582 | Aldehyde dehydrogenase family protein. | Ethanolamine utilization protein. | 0.774 |
| adhE_3 | pflC_3 | ERS852407_01589 | ERS852407_05142 | Aldehyde dehydrogenase family protein. | Pyruvate formate-lyase. | 0.517 |
| adhE_3 | porA_1 | ERS852407_01589 | ERS852407_02696 | Aldehyde dehydrogenase family protein. | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.972 |
| csdA_2 | CUN99412.1 | ERS852407_01587 | ERS852407_01581 | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | Microcompartments protein. | 0.882 |
| csdA_2 | adhE_3 | ERS852407_01587 | ERS852407_01589 | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | Aldehyde dehydrogenase family protein. | 0.836 |
| csdA_2 | csdB | ERS852407_01587 | ERS852407_01588 | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. | 0.988 |
| csdA_2 | eutJ1 | ERS852407_01587 | ERS852407_01582 | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | Ethanolamine utilization protein. | 0.802 |
| csdA_2 | pflC_3 | ERS852407_01587 | ERS852407_05142 | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | Pyruvate formate-lyase. | 0.665 |
| csdA_2 | porA_1 | ERS852407_01587 | ERS852407_02696 | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | Pyruvate ferredoxin/flavodoxin oxidoreductase. | 0.991 |
| csdB | CUN99412.1 | ERS852407_01588 | ERS852407_01581 | Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. | Microcompartments protein. | 0.890 |
| csdB | adhE_3 | ERS852407_01588 | ERS852407_01589 | Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. | Aldehyde dehydrogenase family protein. | 0.904 |
| csdB | csdA_2 | ERS852407_01588 | ERS852407_01587 | Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. | Glycyl-radical enzyme activating protein family; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM). | 0.988 |
| csdB | eutJ1 | ERS852407_01588 | ERS852407_01582 | Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily. | Ethanolamine utilization protein. | 0.853 |
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